From Comaiwiki
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Barcodes of length 5 with a distance of 3 bases chosen for the adapter-barcode set on Oct 17 2009. | Barcodes of length 5 with a distance of 3 bases chosen for the adapter-barcode set on Oct 17 2009. | ||
| − | Index of barcodes: | + | <strong>Index of barcodes:</strong> |
>adA2_aaccc | >adA2_aaccc | ||
| + | |||
>adA2_acacg | >adA2_acacg | ||
| + | |||
>adA2_accta | >adA2_accta | ||
| + | |||
>adA2_actac | >adA2_actac | ||
| + | |||
>adA2_aggtt | >adA2_aggtt | ||
| + | |||
>adA2_ccatc | >adA2_ccatc | ||
| + | |||
>adA2_cctct | >adA2_cctct | ||
| + | |||
>adA2_ctagt | >adA2_ctagt | ||
| + | |||
>adA2_ctctg | >adA2_ctctg | ||
| + | |||
>adA2_gagta | >adA2_gagta | ||
| + | |||
>adA2_gatgt | >adA2_gatgt | ||
| + | |||
>adA2_gcaga | >adA2_gcaga | ||
| + | |||
>adA2_gccat | >adA2_gccat | ||
| + | |||
>adA2_ggtaa | >adA2_ggtaa | ||
| + | |||
>adA2_gtcgc | >adA2_gtcgc | ||
| + | |||
>adA2_gtgag | >adA2_gtgag | ||
| + | |||
>adA2_taagc | >adA2_taagc | ||
| + | |||
>adA2_tacag | >adA2_tacag | ||
| + | |||
>adA2_tagct | >adA2_tagct | ||
| + | |||
>adA2_tcgaa | >adA2_tcgaa | ||
| + | |||
>adA2_tctgg | >adA2_tctgg | ||
| + | |||
>adA2_tgatg | >adA2_tgatg | ||
| + | |||
>adA2_tgcgt | >adA2_tgcgt | ||
| + | |||
>adA2_tttcc | >adA2_tttcc | ||
| − | List of oligonucleotides | + | <strong>List of oligonucleotides</strong> |
Important: adA is 5' phosphorylated! | Important: adA is 5' phosphorylated! | ||
Revision as of 12:02, 17 February 2011
A Sample List of 24 well-tested barcodes
These barcodes and associated oligonucleotides were generated using our barcode generator. For more background information on barcoding, see our instructional videos on Illumina Multiplexing.
Barcodes of length 5 with a distance of 3 bases chosen for the adapter-barcode set on Oct 17 2009.
Index of barcodes:
>adA2_aaccc
>adA2_acacg
>adA2_accta
>adA2_actac
>adA2_aggtt
>adA2_ccatc
>adA2_cctct
>adA2_ctagt
>adA2_ctctg
>adA2_gagta
>adA2_gatgt
>adA2_gcaga
>adA2_gccat
>adA2_ggtaa
>adA2_gtcgc
>adA2_gtgag
>adA2_taagc
>adA2_tacag
>adA2_tagct
>adA2_tcgaa
>adA2_tctgg
>adA2_tgatg
>adA2_tgcgt
>adA2_tttcc
List of oligonucleotides
Important: adA is 5' phosphorylated! >adA2_aaccc aacccAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_aaccc ACACTCTTTCCCTACACGACGCTCTTCCGATCTgggttT
>adA2_acacg acacgAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_acacg ACACTCTTTCCCTACACGACGCTCTTCCGATCTcgtgtT
>adA2_accta acctaAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_accta ACACTCTTTCCCTACACGACGCTCTTCCGATCTtaggtT
>adA2_actac actacAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_actac ACACTCTTTCCCTACACGACGCTCTTCCGATCTgtagtT
>adA2_aggtt aggttAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_aggtt ACACTCTTTCCCTACACGACGCTCTTCCGATCTaacctT
>adA2_ccatc ccatcAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_ccatc ACACTCTTTCCCTACACGACGCTCTTCCGATCTgatggT
>adA2_cctct cctctAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_cctct ACACTCTTTCCCTACACGACGCTCTTCCGATCTagaggT
>adA2_ctagt ctagtAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_ctagt ACACTCTTTCCCTACACGACGCTCTTCCGATCTactagT
>adA2_ctctg ctctgAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_ctctg ACACTCTTTCCCTACACGACGCTCTTCCGATCTcagagT
>adA2_gagta gagtaAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_gagta ACACTCTTTCCCTACACGACGCTCTTCCGATCTtactcT
>adA2_gatgt gatgtAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_gatgt ACACTCTTTCCCTACACGACGCTCTTCCGATCTacatcT
>adA2_gcaga gcagaAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_gcaga ACACTCTTTCCCTACACGACGCTCTTCCGATCTtctgcT
>adA2_gccat gccatAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_gccat ACACTCTTTCCCTACACGACGCTCTTCCGATCTatggcT
>adA2_ggtaa ggtaaAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_ggtaa ACACTCTTTCCCTACACGACGCTCTTCCGATCTttaccT
>adA2_gtcgc gtcgcAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_gtcgc ACACTCTTTCCCTACACGACGCTCTTCCGATCTgcgacT
>adA2_gtgag gtgagAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_gtgag ACACTCTTTCCCTACACGACGCTCTTCCGATCTctcacT
>adA2_taagc taagcAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_taagc ACACTCTTTCCCTACACGACGCTCTTCCGATCTgcttaT
>adA2_tacag tacagAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_tacag ACACTCTTTCCCTACACGACGCTCTTCCGATCTctgtaT
>adA2_tagct tagctAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_tagct ACACTCTTTCCCTACACGACGCTCTTCCGATCTagctaT
>adA2_tcgaa tcgaaAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_tcgaa ACACTCTTTCCCTACACGACGCTCTTCCGATCTttcgaT
>adA2_tctgg tctggAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_tctgg ACACTCTTTCCCTACACGACGCTCTTCCGATCTccagaT
>adA2_tgatg tgatgAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_tgatg ACACTCTTTCCCTACACGACGCTCTTCCGATCTcatcaT
>adA2_tgcgt tgcgtAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_tgcgt ACACTCTTTCCCTACACGACGCTCTTCCGATCTacgcaT
>adA2_tttcc tttccAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG >adB2_tttcc ACACTCTTTCCCTACACGACGCTCTTCCGATCTggaaaT