From Comaiwiki

(Heterosis)
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==Heterosis==
 
==Heterosis==
 
*[http://comailab.genomecenter.ucdavis.edu/index.php/Rice_RNA-Seq RNAseq reads from rice varieties and hybrids]
 
*[http://comailab.genomecenter.ucdavis.edu/index.php/Rice_RNA-Seq RNAseq reads from rice varieties and hybrids]
* Coming soon (by Nov 2012): CHIPseq reads from rice varieties and hybrids
+
* [http://comailab.genomecenter.ucdavis.edu/index.php/CHIP CHIPseq reads from rice varieties and hybrids]
 +
 
 
==Polyploidy==
 
==Polyploidy==
 
*RIL map of the Col-0 x Warschau population
 
*RIL map of the Col-0 x Warschau population

Revision as of 11:04, 2 July 2013

Logo.png

This page summarizes the methods and data available from the Comai lab

Contents

TILLING and High throughput sequencing

Custom barcoding for Illumina and Illumina barcoded reads pipeline

RESCAN: genotyping and mutation discovery

Exome capture: genotyping and mutation discovery

Discover CNV in genomes (a Matt Porter and Korf lab collaboration)

Heterosis

Polyploidy

Functional genomics of plant polyploids: NSF DBI 0733857

Protien Family Data Files

REVOLUTA legacy data

Funding

This page and the connected tools are funded by:

  • NSF Plant Genome grant DBI-0733857 (Functional Genomics of Polyploids)
  • NSF Plant Genome grant DBI-0924025. Heterosis Challenge Grant (HCG):The Regulatory Disruption Hypothesis for Heterosis
  • NSF Plant Genome grant DBI-0822383 ("TILLING by Sequencing")
  • National Institutes of Health R01 GM076103-01A1 (Dosage dependent regulation in hybridization) to LC.
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