From Comaiwiki

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**[http://comailab.genomecenter.ucdavis.edu/index.php/Entry_agree cDNA contigs]
 
**[http://comailab.genomecenter.ucdavis.edu/index.php/Entry_agree cDNA contigs]
 
*Karyotypes of trisomic and translocated trisomic. <ref name=PMID:20876566/> [http://www.ncbi.nlm.nih.gov/sra/SRX027140 Dataset]
 
*Karyotypes of trisomic and translocated trisomic. <ref name=PMID:20876566/> [http://www.ncbi.nlm.nih.gov/sra/SRX027140 Dataset]
*Bin-by-sam, a karyotyping tool
+
*[http://comailab.genomecenter.ucdavis.edu/index.php/Bin-by-sam Bin-by-sam, a karyotyping tool]
  
 
==Functional genomics of plant polyploids: NSF DBI 0733857==
 
==Functional genomics of plant polyploids: NSF DBI 0733857==

Revision as of 09:58, 8 July 2013

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This page summarizes the methods and data available from the Comai lab

Contents

TILLING and High throughput sequencing

Custom barcoding for Illumina and Illumina barcoded reads pipeline

RESCAN: genotyping and mutation discovery

Exome capture: genotyping and mutation discovery

Discover CNV in genomes (a Matt Porter and Korf lab collaboration)

Heterosis

Polyploidy

Functional genomics of plant polyploids: NSF DBI 0733857

Protien Family Data Files

REVOLUTA legacy data

Funding

This page and the connected tools are funded by:

  • NSF Plant Genome grant DBI-0733857 (Functional Genomics of Polyploids)
  • NSF Plant Genome grant DBI-0924025. Heterosis Challenge Grant (HCG):The Regulatory Disruption Hypothesis for Heterosis
  • NSF Plant Genome grant DBI-0822383 ("TILLING by Sequencing")
  • National Institutes of Health R01 GM076103-01A1 (Dosage dependent regulation in hybridization) to LC.
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