From Comaiwiki

(Solexa Runs)
(Solexa Runs)
Line 475: Line 475:
 
||FC60006AAXX
 
||FC60006AAXX
 
||E8-10-I3
 
||E8-10-I3
||41, SR
+
||40, SR
 
||212153/193364
 
||212153/193364
 
||160004/151131
 
||160004/151131
Line 488: Line 488:
 
||FC60006AAXX
 
||FC60006AAXX
 
||E8-11-A2
 
||E8-11-A2
||41, SR
+
||40, SR
 
||220095/193364
 
||220095/193364
 
||164546/151131
 
||164546/151131
Line 501: Line 501:
 
||FC60006AAXX
 
||FC60006AAXX
 
||E8-11-B2
 
||E8-11-B2
||41, SR
+
||40, SR
 
||189959/193364
 
||189959/193364
 
||152595/151131
 
||152595/151131
Line 514: Line 514:
 
||FC60006AAXX
 
||FC60006AAXX
 
||E8-11-I2
 
||E8-11-I2
||41, SR
+
||40, SR
 
||233678/193364
 
||233678/193364
 
||159035/151131
 
||159035/151131
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||FC600H7AAXX
 
||FC600H7AAXX
 
||E8-10-A3
 
||E8-10-A3
||41, SR
+
||40, SR
 
||191921/184587
 
||191921/184587
 
||149430/141978
 
||149430/141978
Line 540: Line 540:
 
||FC600H7AAXX
 
||FC600H7AAXX
 
||E8-10-B3
 
||E8-10-B3
||41, SR
+
||40, SR
 
||190749/184587
 
||190749/184587
 
||149089/141978
 
||149089/141978
Line 553: Line 553:
 
||FC61064AAXX
 
||FC61064AAXX
 
||XY Test
 
||XY Test
||85, SR
+
||80, SR
 
||113134/145246
 
||113134/145246
 
||94560/112839
 
||94560/112839
Line 566: Line 566:
 
||FC61064AAXX
 
||FC61064AAXX
 
||YX-Test
 
||YX-Test
||85, SR
+
||80, SR
 
||113134/145246
 
||113134/145246
 
||94560/112839
 
||94560/112839
Line 579: Line 579:
 
||FC612P9AAXX
 
||FC612P9AAXX
 
||RNAseqF
 
||RNAseqF
||41, SR
+
||40, SR
 
||163924/203804
 
||163924/203804
 
||140937/110930
 
||140937/110930
Line 592: Line 592:
 
||FC612P9AAXX
 
||FC612P9AAXX
 
||RNAseqG
 
||RNAseqG
||41, SR
+
||40, SR
 
||201363/203804
 
||201363/203804
 
||152113/110930
 
||152113/110930
Line 605: Line 605:
 
||FC612P9AAXX
 
||FC612P9AAXX
 
||RNAseqH
 
||RNAseqH
||41, SR
+
||40, SR
 
||200365/203804
 
||200365/203804
 
||152030/110930
 
||152030/110930
Line 618: Line 618:
 
||FC432CAAAXX
 
||FC432CAAAXX
 
||RNAseqC
 
||RNAseqC
||41, SR
+
||40, SR
 
||210950/178648
 
||210950/178648
 
||151637/105609
 
||151637/105609
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||FC432CAAAXX
 
||FC432CAAAXX
 
||RNAseqD
 
||RNAseqD
||41, SR
+
||40, SR
 
||210645/178648
 
||210645/178648
 
||153333/105609
 
||153333/105609
Line 644: Line 644:
 
||FC432CAAAXX
 
||FC432CAAAXX
 
||RNAseqE
 
||RNAseqE
||41, SR
+
||40, SR
 
||194046/178648
 
||194046/178648
 
||146486/105609
 
||146486/105609
Line 657: Line 657:
 
||FC431E5AAXX
 
||FC431E5AAXX
 
||1109#1
 
||1109#1
||41, SR
+
||40, SR
 
||153747/194981
 
||153747/194981
 
||109506/126897
 
||109506/126897
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||FC431E5AAXX
 
||FC431E5AAXX
 
||1109#2
 
||1109#2
||41, SR
+
||40, SR
 
||173754/194981
 
||173754/194981
 
||113811/126897
 
||113811/126897
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||FC431E5AAXX
 
||FC431E5AAXX
 
||1109#3
 
||1109#3
||41, SR
+
||40, SR
 
||184959/194981
 
||184959/194981
 
||110833/126897
 
||110833/126897
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||FC431E5AAXX
 
||FC431E5AAXX
 
||1109#4
 
||1109#4
||41, SR
+
||40, SR
 
||168504/194981
 
||168504/194981
 
||121500/126897
 
||121500/126897
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||FC43221AAXX
 
||FC43221AAXX
 
||RNA-seqA-chen
 
||RNA-seqA-chen
||41, SR
+
||40, SR
 
||228931/214114
 
||228931/214114
 
||174100/105109
 
||174100/105109
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||FC43221AAXX
 
||FC43221AAXX
 
||RNA-seqB-chen
 
||RNA-seqB-chen
||41, SR
+
||40, SR
 
||196705/214114
 
||196705/214114
 
||162964/105109
 
||162964/105109
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||FC43221AAXX
 
||FC43221AAXX
 
||RNAseqA
 
||RNAseqA
||41, SR
+
||40, SR
 
||228931/214114
 
||228931/214114
 
||174100/105109
 
||174100/105109
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||FC43221AAXX
 
||FC43221AAXX
 
||RNAseqA
 
||RNAseqA
||41, SR
+
||40, SR
 
||196705/214114
 
||196705/214114
 
||162964/105109
 
||162964/105109
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||FC432DCAAXX
 
||FC432DCAAXX
 
||DB1
 
||DB1
||85, SR
+
||80, SR
 
||147251/136949
 
||147251/136949
 
||129195/118141
 
||129195/118141
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||FC432DCAAXX
 
||FC432DCAAXX
 
||DB2
 
||DB2
||85, SR
+
||80, SR
 
||180907/136949
 
||180907/136949
 
||151620/118141
 
||151620/118141
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||FC431TDAAXX
 
||FC431TDAAXX
 
||jmm4
 
||jmm4
||41, SR
+
||40, SR
 
||76168/141356
 
||76168/141356
 
||68000/119683
 
||68000/119683
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||FC431TDAAXX
 
||FC431TDAAXX
 
||Sue
 
||Sue
||41, SR
+
||40, SR
 
||124639/141356
 
||124639/141356
 
||99432/119683
 
||99432/119683
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||FC431WTAAXX
 
||FC431WTAAXX
 
||T6R1 diluted again
 
||T6R1 diluted again
||41, SR
+
||40, SR
 
||219165/168432
 
||219165/168432
 
||133966/125555
 
||133966/125555
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||FC431P8AAXX
 
||FC431P8AAXX
 
||09Exp8-9#2
 
||09Exp8-9#2
||41, SR
+
||40, SR
 
||221181/166314
 
||221181/166314
 
||125493/125715
 
||125493/125715
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||FC431P8AAXX
 
||FC431P8AAXX
 
||09Exp8-10A4
 
||09Exp8-10A4
||41, SR
+
||40, SR
 
||231773/166314
 
||231773/166314
 
||124890/125715
 
||124890/125715
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||8
 
||8
 
||FC431P8AAXX
 
||FC431P8AAXX
||jimm
+
||jmm
||41, SR
+
||40, SR
 
||101406/166314
 
||101406/166314
 
||87713/125715
 
||87713/125715
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||FC430AAAAXX
 
||FC430AAAAXX
 
||T6R1
 
||T6R1
||41, SR
+
||40, SR
 
||
 
||
 
||
 
||
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||FC430AAAAXX
 
||FC430AAAAXX
 
||T6R2
 
||T6R2
||41, SR
+
||40, SR
 
||
 
||
 
||
 
||
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||FC42PFLAAXX_2
 
||FC42PFLAAXX_2
 
||T6R1
 
||T6R1
||42, SR
+
||40, SR
 
||
 
||
 
||
 
||
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||FC42PFLAAXX_2
 
||FC42PFLAAXX_2
 
||T6R2
 
||T6R2
||42, SR
+
||40, SR
 
||
 
||
 
||
 
||
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||FC42PFLAAXX_2
 
||FC42PFLAAXX_2
 
||T6R3
 
||T6R3
||42, SR
+
||40, SR
 
||
 
||
 
||
 
||
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||FC42P69AAXX
 
||FC42P69AAXX
 
||09Exp8-9#1
 
||09Exp8-9#1
||83, SR
+
||80, SR
 
||
 
||
 
||
 
||
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||FC42P69AAXX
 
||FC42P69AAXX
 
||09Exp8-9#2
 
||09Exp8-9#2
||83, SR
+
||80, SR
 
||
 
||
 
||
 
||
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||FC42P69AAXX
 
||FC42P69AAXX
 
||09Exp8-9#3
 
||09Exp8-9#3
||83, SR
+
||80, SR
 
||
 
||
 
||
 
||
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||FC42P69AAXX
 
||FC42P69AAXX
 
||09Exp8-9#6
 
||09Exp8-9#6
||83, SR
+
||80, SR
 
||
 
||
 
||
 
||
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||FC42P69AAXX
 
||FC42P69AAXX
 
||09Exp8-10-B4
 
||09Exp8-10-B4
||83, SR
+
||80, SR
 
||
 
||
 
||
 
||
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||FC42P69AAXX
 
||FC42P69AAXX
 
||09Exp8-10-I4
 
||09Exp8-10-I4
||83, SR
+
||80, SR
 
||
 
||
 
||
 
||
Line 1,008: Line 1,008:
 
||FC42PFVAAXX
 
||FC42PFVAAXX
 
||T6C12
 
||T6C12
||41, SR
+
||40, SR
 
||
 
||
 
||
 
||

Revision as of 10:24, 28 June 2010

Solexa Runs

Date Lane # Flow Cell Lane Name Type Number of Clusters (Raw)/Average for Chip Number of Clusters (PF)/Average for Chip Percent Clusters Retained Lane Yield (kbases) Starting Material Person Analysis
6/10/10 1 FC61YPNAAXX #1 2T0 80, SR 347288/317505 268417/243615 77.39% 2737852 A. thaliana
6/10/10 2 FC61YPNAAXX #2 2T0 80, SR 357229/317505 274045/243615 76.80% 2795258 A. thaliana
6/10/10 3 FC61YPNAAXX T7 Lib 12 80, SR 274012/317505 219324/243615 80.05% 2237100 N/A TILLING
6/10/10 6 FC61YPNAAXX #5 2T6 80, SR 385631/317505 265024/243615 68.75% 2703240 A. thaliana
6/10/10 7 FC61YPNAAXX #7 2T6 80, SR 338509/317505 268248/243615 79.30% 2736131 A. thaliana
6/10/10 8 FC61YPNAAXX #9 2T15 80, SR 350679/317505 267403/243615 76.31% 2727514 A. thaliana
6/1/10 6 FC61YT3AAXX Homemade 40, SR 284089/328830 227314/232278 80.05% 1118386 Tomato, Rice and A. thaliana JMM/IH
5/27/10 1 FC61VV6AAXX T7lib2 80, SR 328765/281911 194416/205340 59.32% 1966522 N/A
5/27/10 2 FC61VV6AAXX T7lib3 80, SR 301509/281911 205183/205340 68.13% 2092870 N/A
5/27/10 3 FC61VV6AAXX T7lib4 80, SR 312888/281911 202168/205340 64.65% 2062122 N/A
5/27/10 5 FC61VV6AAXX T7lib5 80, SR 277671/281911 216146/205340 77.97% 2204692 N/A
5/27/10 6 FC61VV6AAXX T7lib6 80, SR 309203/281911 206838/205340 66.9% 2109752 N/A
5/27/10 7 FC61VV6AAXX T7lib7 80, SR 219408/281911 186791/205340 85.17% 1905272 N/A
5/27/10 8 FC61VV6AAXX T7lib8 80, SR 219553/281911 187498/205340 85.43% 1912483 N/A
5/12/10 2 PEFC61LFKAAXX T9lib2 80, PE 273938/267324 251543/233533 91.84 2565738 N/A
5/12/10 3 PEFC61LFKAAXX DB6 80, PE 278355/267324 249040/233533 89.51% 2540202 A. thaliana
5/5/10 8 FC61L7JAAXX 6944+6967I 40, SR 292739/281741 195181/211413 66.97% 960287 A. thaliana
5/3/10 1 PEFC61LFFAAXX Lib8-3 80, PE 247320/247320 207735/211473 84.10 2118900 N/A
5/3/10 2 PEFC61LFFAAXX Lib8-4 80, PE 259755/247320 196240/211473 75.71% 2001655 N/A
5/3/10 3 PEFC61LFFAAXX Lib8-5 80, PE 247814/247320 218854/2114723 88.37% 2232316 N/A
4/30/10 7 PEFC61E1HAAXX TomGen 100, PE 267283/246830 226228/219498 84.68% 2741883 Tomato
4/28/10 2 FC61L7AAXX DB5 40, SR 387712/199460 220853/150597 56.96% 1086597 A. thaliana
4/16/10 4 FC61L62AAXX ATC4X2 40, SR 219077/220874 183327/185756 83.73 901969 A. thaliana
4/15/10 6 PEFC61DYCAAXX Lib T8-1 80, SR 313897/259133 262647/198651 83.66 2679003 N/A
4/15/10 7 PEFC61DYCAAXX Lib T8-2 80, SR 300399/259133 142929/198651 47.60% 1397133 N/A
4/15/10 8 PEFC61DYCAAXX Lib T8-3 80, SR 306072/259133 205729/198651 67.06% 2098431 N/A
3/24/10 2 FC614B8AAXX DP, BB 80, SR 224252/247021 189081/185467 84.39% 1928621 A. thaliana
3/24/10 3 FC614B8AAXX T7 1:6 11 80, SR 213761/247021 168751/185467 79.02% 1721260 N/A
3/24/10 5 FC614B8AAXX T7 1:6 7 80, SR 168955/247021 145171/185467 85.96% 1480746 A. thaliana
3/10/10 3 FC61477AAXX IH1 40, SR 226388/265253 196200/221763 86.68 965304 A. thaliana
2/18/10 1 PEFC61FLRAAXX Care300N 80, SR 236585/231069 203626/198109 86.09% 2076983 A. thaliana
1/17/10 3 FC61F6FAAXX EcoTill 80, SR 112918/155892 102042/132155 90.39% 1040827 A. thaliana
1/17/10 5 FC61F6FAAXX DB3 80, SR 171036/155892 146781/132155 85.92% 1497165 A. thaliana
1/17/10 6 FC61F6FAAXX DB4 80, SR 164698/155892 143045/132155 86.93% 1459061 A. thaliana
1/17/10 7 FC61F6FAAXX T7Lib1 80, SR 168665/155892 132023/132155 78.42% 1346636 A. thaliana
12/22/09 2 FC60006AAXX E8-10-I3 40, SR 212153/193364 160004/151131 75.56% 787220 A. thaliana
12/22/09 3 FC60006AAXX E8-11-A2 40, SR 220095/193364 164546/151131 74.91% 809566 A. thaliana
12/22/09 4 FC60006AAXX E8-11-B2 40, SR 189959/193364 152595/151131 80.40% 750766 A. thaliana
12/22/09 5 FC60006AAXX E8-11-I2 40, SR 233678/193364 159035/151131 68.23% 782451 A. thaliana
12/18/09 3 FC600H7AAXX E8-10-A3 40, SR 191921/184587 149430/141978 77.93% 735196 A. thaliana
12/18/09 4 FC600H7AAXX E8-10-B3 40, SR 190749/184587 149089/141978 78.21% 733515 A. thaliana
12/9/09 6 FC61064AAXX XY Test 80, SR 113134/145246 94560/112839 83.56% 964508 A. thaliana
12/9/09 6 FC61064AAXX YX-Test 80, SR 113134/145246 94560/112839 83.56% 964508 A. thaliana
12/8/09 2 FC612P9AAXX RNAseqF 40, SR 163924/203804 140937/110930 86.04% 693409 A. thaliana
12/8/09 3 FC612P9AAXX RNAseqG 40, SR 201363/203804 152113/110930 75.62% 748397 A. thaliana
12/8/09 4 FC612P9AAXX RNAseqH 40, SR 200365/203804 152030/110930 75.95% 747985 A. thaliana
12/2/09 6 FC432CAAAXX RNAseqC 40, SR 210950/178648 151637/105609 72.02% 746053 A. thaliana
12/2/09 7 FC432CAAAXX RNAseqD 40, SR 210645/178648 153333/105609 72.96% 754397 A. thaliana
12/2/09 8 FC432CAAAXX RNAseqE 40, SR 194046/178648 146486/105609 75.73% 720708 A. thaliana
11/20/09 2 FC431E5AAXX 1109#1 40, SR 153747/194981 109506/126897 71.62% 538768 A. thaliana
11/20/09 3 FC431E5AAXX 1109#2 40, SR 173754/194981 113811/126897 65.65% 559947 A. thaliana
11/20/09 6 FC431E5AAXX 1109#3 40, SR 184959/194981 110833/126897 60.14% 545297 A. thaliana
11/20/09 7 FC431E5AAXX 1109#4 40, SR 168504/194981 121500/126897 72.23% 597779 A. thaliana
11/17/09 2 FC43221AAXX RNA-seqA-chen 40, SR 228931/214114 174100/105109 76.14% 856572 A. thaliana
11/17/09 3 FC43221AAXX RNA-seqB-chen 40, SR 196705/214114 162964/105109 82.94% 801783 A. thaliana
11/17/09 2 FC43221AAXX RNAseqA 40, SR 228931/214114 174100/105109 76.14% 856572 A. thaliana
11/17/09 3 FC43221AAXX RNAseqA 40, SR 196705/214114 162964/105109 82.94% 801783 A. thaliana
11/16/09 3 FC432DCAAXX DB1 80, SR 147251/136949 129195/118141 87.76% 1317790 A. thaliana
11/16/09 5 FC432DCAAXX DB2 80, SR 180907/136949 151620/118141 83.89% 1546524 A. thaliana
10/20/09 3 FC431TDAAXX jmm4 40, SR 76168/141356 68000/119683 89.30% 326404 A. thaliana
10/20/09 4 FC431TDAAXX Sue 40, SR 124639/141356 99432/119683 70.83% 477278 A. thaliana
10/12/09 2 FC431WTAAXX T6R1 diluted again 40, SR 219165/168432 133966/125555 61.24% 643040 A. thaliana
10/8/09 3 FC431P8AAXX 09Exp8-9#2 40, SR 221181/166314 125493/125715 56.57% 617427 A. thaliana
10/8/09 4 FC431P8AAXX 09Exp8-10A4 40, SR 231773/166314 124890/125715 53.84% 614462 A. thaliana
10/8/09 8 FC431P8AAXX jmm 40, SR 101406/166314 87713/125715 86.52% 431550 A. thaliana
9/25/10 2 FC430AAAAXX T6R1 40, SR rice
9/25/10 3 FC430AAAAXX T6R2 40, SR rice
9/22/09 2 FC42PFLAAXX_2 T6R1 40, SR rice
9/22/09 3 FC42PFLAAXX_2 T6R2 40, SR rice
9/22/09 4 FC42PFLAAXX_2 T6R3 40, SR rice
9/17/09 2 FC42P69AAXX 09Exp8-9#1 80, SR A. thaliana
9/17/09 3 FC42P69AAXX 09Exp8-9#2 80, SR A. thaliana
9/17/09 4 FC42P69AAXX 09Exp8-9#3 80, SR A. thaliana
9/17/09 5 FC42P69AAXX 09Exp8-9#6 80, SR A. thaliana
9/17/09 7 FC42P69AAXX 09Exp8-10-B4 80, SR A. thaliana
9/17/09 8 FC42P69AAXX 09Exp8-10-I4 80, SR A. thaliana
9/14/09 4 FC42PFVAAXX T6C12 40, SR rice
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